About SHARK

Owned by Robert Schulz
Last updated: 24/08/2023 by Michel Villerius
2 min read

What is the SHARK HPC cluster?

SHARK is the high-performance computing cluster of the LUMC.

 

Cluster overview

Hardware configuration

List of Nodes

Login and control nodes

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

res-hpc-lo02

145.88.76.217

Intel Gold 6248

80

128Gb

0

Login node + Remote Visualization

PowerEdge R740

res-hpc-lo03

145.88.76.201

Intel Platinum 8280

4

8Gb

0

Diagnostic Login node

VMware

res-hpc-lo04

145.88.76.219

Intel Platinum 8280

8

32Gb

0

Login node

VMware

res-hpc-ma01

145.88.76.246

Intel Platinum 8280

2

4Gb

0

Controller node 1

VMware

res-hpc-ma02

145.88.76.249

Intel Platinum 8280

1

4Gb

0

Controller node 2

VMware

res-hpc-db01

145.88.76.245

Intel Platinum 8280

2

16Gb

0

Slurm DB node

VMware

res-hpc-ood01

145.88.76.231

Intel Platinum 8280

2

4Gb

0

OpenOnDemand portal

VMware

Execution nodes

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

res-hpc-exe001

145.88.76.212

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe002

145.88.76.244

Intel E5-2697

48

128Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe003

145.88.76.243

Intel E5-2690

48

128Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe005

145.88.76.211

Intel E5-2697

48

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe007

145.88.76.220

Intel E5-2697

24

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe008

145.88.76.224

Intel E5-2697

24

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe009

145.88.76.221

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe011

145.88.76.223

Intel E5-2697

24

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe012

145.88.76.233

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe014

145.88.76.242

Intel E5-2697

24

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe027

145.88.76.209

Intel E5-2690

28

128Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe013

145.88.76.247

Intel E5-2670

16

128Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe024

145.88.76.232

Intel E5-2690

24

128Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe029

145.88.76.210

Intel E5-2690

28

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe030

145.88.76.215

Intel E5-2697

24

384Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe031

145.88.76.214

Intel E5-2697

24

512Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe032

145.88.76.235

Intel E5-4650

48

1024Gb

0

Execution node

Dell PowerEdge M830

res-hpc-exe033

145.88.76.227

Intel E5-4650

48

1024Gb

0

Execution node

Dell PowerEdge M830

res-hpc-exe034

145.88.76.207

Intel E5-2697

24

512Gb

0

Execution node

Dell PowerEdge M620

res-hpc-exe035

145.88.76.239

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe036

145.88.76.204

Intel E5-2690

28

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe039

145.88.76.206

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe040

145.88.76.228

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe041

145.88.76.208

Intel E5-2690

24

384Gb

0

Execution node

Dell PowerEdge M630

res-hpc-exe042

145.88.76.182

Intel Gold 6252

24

96Gb

0

Execution node

VMware

res-hpc-exe043

145.88.76.181

Intel Gold 6252

24

96Gb

0

Execution node

VMware

res-hpc-gpu01

145.88.76.237

Intel Platinum 8160

48

512Gb

3

GPU node, Execution node

Dell PowerEdge R740

res-hpc-gpu02

145.88.76.234

Intel Platinum 8160

48

512Gb

2

GPU node, Execution node

Dell PowerEdge R740

res-hpc-mem01

145.88.76.200

Intel E7-4890

60

3072Gb

0

Execution node

Dell PowerEdge R920

res-hpc-mem02

145.88.76.218

Intel E5-4657L

48

1024Gb

0

Execution node

Dell PowerEdge M820

GPU-equipped nodes

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

Hostname

IP address

CPU

Cores

Memory

GPUs

Purpose

Type machine

res-hpc-gpu01

145.88.76.237

Intel Platinum 8160

48

512Gb

3

GPU node, Execution node

Dell PowerEdge R740

res-hpc-gpu02

145.88.76.234

Intel Platinum 8160

48

512Gb

2

GPU node, Execution node

Dell PowerEdge R740

res-hpc-gpu03

145.88.76.190

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu04

145.88.76.189

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu05

145.88.76.188

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu06

145.88.76.187

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu07

145.88.76.186

Intel Gold 6252

12

96Gb

2

GPU node

VMware

res-hpc-gpu08

145.88.76.185

Intel Gold 6252

12

96Gb

1

GPU node

VMware

res-hpc-gpu09

145.88.76.184

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu10

145.88.76.180

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-gpu11

145.88.76.179

Intel Gold 6252

6

48Gb

1

GPU node

VMware

res-hpc-lkeb03

145.88.76.226

Intel E5-2698

40

256Gb

4

GPU node

NVIDIA DGX Station

res-hpc-lkeb04

145.88.76.248

Intel E5-1650

12

256Gb

4

GPU node

ASUS All Series

res-hpc-lkeb05

145.88.76.194

Intel Gold 6134

16

256Gb

3

GPU node

Precision 7920 Rack

res-hpc-lkeb06

145.88.76.225

Intel Gold 6234

16

256Gb

3

GPU node

Precision 7920 Rack

res-hpc-lkeb07

145.88.76.203

Intel Gold 6234

16

256Gb

3

GPU node

Precision 7920 Rack

res-hpc-path01

145.88.76.197

Intel Gold 6234

16

256b

3

GPU node

Precision 7920 Rack

res-hpc-path02

145.88.76.222

Intel Gold 6234

16

256Gb

3

GPU node

Precision 7920 Rack

GPU overview

The table below lists the types of GPUs available on the GPU-equipped nodes.

Hostname

Access

GPU 0 (cores/mem)

GPU 1 (cores/mem)

GPU 2 (cores/mem)

GPU 3 (cores/mem)

Hostname

Access

GPU 0 (cores/mem)

GPU 1 (cores/mem)

GPU 2 (cores/mem)

GPU 3 (cores/mem)

res-hpc-lo02

Everyone

Tesla T4 (2560/16Gb)

 

 

 

res-hpc-gpu0[1-2]

Everyone

TITAN Xp (3840/12Gb)

TITAN Xp (3840/12Gb)

TITAN Xp (3840/12Gb)

 

res-hpc-lkeb03

LKEB

Tesla V100-DGXS (5120/16Gb)

Tesla V100-DGXS (5120/16Gb)

Tesla V100-DGXS (5120/16Gb)

Tesla V100-DGXS (5120/16Gb)

res-hpc-lkeb04

LKEB

GeForce GTX 1080 Ti (3584/12Gb)

GeForce GTX 1080 Ti (3584/12Gb)

GeForce GTX 1080 Ti (3584/12Gb)

GeForce GTX 1080 Ti (3584/12Gb)

res-hpc-lkeb0[5-7]

LKEB

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

 

res-hpc-path0[1-2]

Pathologie

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

 

res-hpc-gpu03

Everyone

GRID V100D-16Q (16384/16Gb)

 

 

 

res-hpc-gpu04

Everyone

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

Quadro RTX 6000 (4608/24Gb)

 

res-hpc-gpu0[5-6]

Radio Therapy

GRID V100D-16Q (16384/16Gb)

 

 

 

res-hpc-gpu07

Everyone

GRID V100S-32Q (32768/32Gb)

GRID V100S-32Q (32768/32Gb)

 

 

res-hpc-gpu08

Radio Therapy

GRID V100S-32Q (32768/32Gb)

 

 

 

res-hpc-gpu09

Everyone

GRID V100D-16Q (16384/16Gb)

 

 

 

res-hpc-gpu[10-11]

Radio Therapy

GRID V100S-16Q (16384/16Gb)

 

 

 

Network overview

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