Publications featuring ALICE
- 1 Articles with acknowledgements to the use of ALICE
- 1.1 Archeology
- 1.2 Astronomy and Astrophysics
- 1.3 Biochemistry
- 1.4 Biology
- 1.5 Biophyiscs
- 1.6 Computer Sciences
- 1.7 Ecology
- 1.8 Humanities
- 1.9 Genomics
- 1.10 Medical Science
- 1.11 Physics
- 1.12 Social Sciences
- 2 Leiden researchers and their use of HPC
- 3 News articles featuring ALICE
Articles with acknowledgements to the use of ALICE
Please acknowledge the use of ALICE in your publications as outlined here: Acknowledging ALICE
Category | Title | Author | Journal | Year | Link |
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Archeology |
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Archeology | Hunter-gatherer impact on European interglacial vegetation: A modelling approach | A. Nikulina et al. | Quaternary Science Reviews | 2024 | |
Astronomy and Astrophysics |
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Astronomy and Astrophysics | Reducing false positives in strong lens detection through effective augmentation and ensemble learning | S. Rezaei et al. | MNRAS | 2025 | |
Astronomy and Astrophysics | KiDS-Legacy calibration: Unifying shear and redshift calibration with the SKiLLS multi-band image simulations | S. S. Li et al | A&A | 2022 | |
Astronomy and Astrophysics | High-level ab initio quartic force fields and spectroscopic characterization of C2N− | C. M. R. Rocha and H. Linnartz | Phys. Chem. Chem. Phys, | 2021 | https://doi.org/10.1039/D1CP03505C |
Astronomy and Astrophysics | Effects of stellar density on the photoevaporation of circumstellar discs | F. Concha-Ramirez et al. | MNRAS | 2021 | |
Astronomy and Astrophysics | Lucky planets: how circum-binary planets survive the supernova in one of the inner-binary components | F. Fagginger Auer & S. Portegies Zwart | eprint arXiv:2101.08033, Submitted to SciPost Astronomy | 2021 | https://ui.adsabs.harvard.edu/link_gateway/2021arXiv210108033F/arxiv:2101.08033 |
Astronomy and Astrophysics | Trimodal structure of Hercules stream explained by originating from bar resonances | T. Asano et al. | MNRAS | 2020 | |
Astronomy and Astrophysics | Oort cloud Ecology II: Extra-solar Oort clouds and the origin of asteroidal interlopers | S. Portegies Zwart | eprint arXiv:2011.08257, accepted for publication by A&A | 2020 | https://ui.adsabs.harvard.edu/link_gateway/2020arXiv201108257P/arxiv:2011.08257 |
Astronomy and Astrophysics | The ecological impact of high-performance computing in astrophysics | S. Portegies Zwart | Nature Astronomy | 2020 | |
Biochemistry |
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Biochemistry | Menaquinone-specific turnover by Mycobacterium tuberculosis cytochrome bd is redox regulated by the Q-loop disulfide bond | T. T. van der Velden et al. | Journal of Biological Chemistry | 2025 | |
Biochemistry | Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending | Y. Hu et al. | Nucleic Acids Research | 2024 | |
Biochemistry | Histones and histone variant families in prokaryotes | Schwab, S., Hu, Y., van Erp, B. et al. | Nature Communication | 2024 | |
Biology |
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Biology | Tokay gecko tail regeneration involves temporally collinear expression of HOXC genes and early expression of satellite cell markers | L., Benes, V., Blom, S. et al., | BMC Biol | 2025 | |
Biology | How cells align to structured collagen fibrils: a hybrid cellular Potts and molecular dynamics model with dynamic mechanosensitive focal adhesions | K. A. E. Keijzer, E, Tsingos, R. M. H. Merks | Front. Cell Dev. Biol. | 2025 | |
Biology | A Multiscale Spatiotemporal Model Including a Switch from Aerobic to Anaerobic Metabolism Reproduces Succession in the Early Infant Gut Microbiota | D.M. Versluis et al. | mSystems | 2022 | |
Biophyiscs |
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Biophysics | Hybrid cellular Potts and bead-spring modeling of cells in fibrous extracellular matrix | E. Tsingos et al. | Biophysical Journal | 2023 | |
Computer Sciences |
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Computer Sciences | Curriculum reinforcement learning for quantum architecture search under hardware errors | Y J. Patel et al. | ICLR 2024 | 2024 | |
Computer Sciences | Better Distractions: Transformer-based Distractor Generation and Multiple Choice Question Filtering | J. Offerijns, V. Verberne, T. Verhoe | eprint arXiv:2010.09598 | 2020 | |
Ecology |
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Ecology | MycoAI: Fast and accurate taxonomic classification for fungal ITS sequences | L. Romeijn, A. Bernatavicius, D. Vu | Molecular Ecology Resources | 2024 | |
Ecology | Improving estimations of life history parameters of small animals in mesocosm experiments: A case study on mosquitoes | M. Dellar, B.P. Sam, D. Holmes | Methods in Ecology and Evolution | 2022 | https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.13814 |
Humanities |
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Humanities | Processing syntactic violations in the non-native language: different behavioural and neural correlates as a function of typological similarity? | S. Von Grebmer Zu Wolfsthurn, L. Pablos, N. O. Schiller
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Genomics |
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Genomics | Phylogenomics resolves the puzzling phylogeny of banded newts (genus Ommatotriton) | K. Kalaentzis et al. | Molecular Phylogenetics | 2025 | |
Medical Science |
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Medical Science | Towards robust and accurate estimates of the incubation time distribution, with focus on upper tail probabilities and SARS-CoV-2 infection | V.H. Arnzten, et al. | Statistics in Medicine | 2023 | |
Physics |
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Physics | Loop corrections for hard spheres in Hamming space | A. Ramezanpour, S. Moghimi-Araghi | Journal of Statistical Mechanics: Theory and Experiment | 2025 | |
Physics | Preparing low-variance states using a distributed quantum algorithm | X. Liu, B. F. Schiffer, J. Tura | arXiv:2501.13097 | 2025 | |
Social Sciences |
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Social Sciences | Common multi-day rhythms in smartphone behavior | E. Ceolini, & A. Ghosh | npj Digital Medicine | 2023 |
Leiden researchers and their use of HPC
Identifying Earth-impacting asteroids using an artificial neural network. John D. Hefele, Francesco Bortolussi and Simon Portegies Zwart. Astronomy & Astrophysics, February 2020.
News articles featuring ALICE
Hazardous Object Identifier: Supercomputer Helps to Identify Dangerous Asteroids, Oliver Peckman, HPC Wire, 04 March 2020, link
Elf reuzestenen op ramkoers met de aarde?, Annelies Bes, 13 February 2020, Kijk Magazine, link
Leidse sterrenkundigen ontdekken aardscheerders-in-spé, NOVA, 12 February 2020, link