Publications featuring ALICE
Articles with acknowledgements to the use of ALICE
Please acknowledge the use of ALICE in your publications as outlined here: Acknowledging ALICE
Archeology
Hunter-gatherer impact on European interglacial vegetation: A modelling approach, A. Nikulina et al., Quaternary Science Reviews, January 2024, DOI: https://doi.org/10.1016/j.quascirev.2023.108439
Astronomy and Astrophysics
KiDS-Legacy calibration: Unifying shear and redshift calibration with the SKiLLS multi-band image simulations, S. S. Li et al., A&A, December 2022, DOI: https://doi.org/10.1051/0004-6361/202245210
High-level ab initio quartic force fields and spectroscopic characterization of C2N−, C. M. R. Rocha and H. Linnartz, Phys. Chem. Chem. Phys, November 2021, DOI: https://doi.org/10.1039/D1CP03505C
Effects of stellar density on the photoevaporation of circumstellar discs, F. Concha-Ramirez et al., MNRAS, 501, 1782 (February 2021), DOI: https://doi.org/10.1093/mnras/staa3669
Lucky planets: how circum-binary planets survive the supernova in one of the inner-binary components, F. Fagginger Auer & S. Portegies Zwart, eprint arXiv:2101.08033, Submitted to SciPost Astronomy (January 2021), https://ui.adsabs.harvard.edu/link_gateway/2021arXiv210108033F/arxiv:2101.08033
Trimodal structure of Hercules stream explained by originating from bar resonances, T. Asano et al., MNRAS, 499, 2416 (December 2020), DOI: https://doi.org/10.1093/mnras/staa2849
Oort cloud Ecology II: Extra-solar Oort clouds and the origin of asteroidal interlopers, S. Portegies Zwart, eprint arXiv:2011.08257, accepted for publication by A&A, (November 2020), https://ui.adsabs.harvard.edu/link_gateway/2020arXiv201108257P/arxiv:2011.08257
The ecological impact of high-performance computing in astrophysics, S. Portegies Zwart, Nature Astronomy, 4, 819–822 (September 2020), DOI: https://doi.org/10.1038/s41550-020-1208-y .
Biochemistry
Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending, Y. Hu et al., Nucleic Acids Research (June 2024), DOI: https://doi.org/10.1093/nar/gkae485
Schwab, S., Hu, Y., van Erp, B. et al. Histones and histone variant families in prokaryotes. Nat Commun 15, 7950 (2024). https://doi.org/10.1038/s41467-024-52337-y
Biology
A Multiscale Spatiotemporal Model Including a Switch from Aerobic to Anaerobic Metabolism Reproduces Succession in the Early Infant Gut Microbiota, D.M. Versluis et al., mSystems (September 2022), DOI: https://doi.org/10.1128/msystems.00446-22
Biophyiscs
Hybrid cellular Potts and bead-spring modeling of cells in fibrous extracellular matrix, E. Tsingos et al., Biophysical Journal, 122, 13, 2609, (July 2023), DOI: https://doi.org/10.1016/j.bpj.2023.05.013
Computer Sciences
Curriculum reinforcement learning for quantum architecture search under hardware errors, Yash J. Patel, Akash Kundu, Mateusz Ostaszewski, Xavier Bonet-Monroig, Vedran Dunjko and Onur Danaci, ICLR 2024 Conference (January 2024), Curriculum reinforcement learning for quantum architecture search...
Better Distractions: Transformer-based Distractor Generation and Multiple Choice Question Filtering, J. Offerijns, V. Verberne, T. Verhoe, eprint arXiv:2010.09598, (October 2020), Better Distractions: Transformer-based Distractor Generation and...
Ecology
MycoAI: Fast and accurate taxonomic classification for fungal ITS sequences, L. Romeijn, A. Bernatavicius, D. Vu, Molecular Ecology Resources, August 2024, https://doi.org/10.1111/1755-0998.14006
Improving estimations of life history parameters of small animals in mesocosm experiments: A case study on mosquitoes, M. Dellar, B.P. Sam, D. Holmes, Methods in Ecology and Evolution, (February 2022), https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.13814
Medical Science
Towards robust and accurate estimates of the incubation time distribution, with focus on upper tail probabilities and SARS-CoV-2 infection, V.H. Arnzten, et al., Statistics in Medicine, (April 2023), https://doi.org/10.1002/sim.9726
Social Sciences
Common multi-day rhythms in smartphone behavior, E. Ceolini, & A. Ghosh, npj Digital Medicine, (March 2023), https://doi.org/10.1038/s41746-023-00799-7
Leiden researchers and their use of HPC
Identifying Earth-impacting asteroids using an artificial neural network. John D. Hefele, Francesco Bortolussi and Simon Portegies Zwart. Astronomy & Astrophysics, February 2020.
News articles featuring ALICE
Hazardous Object Identifier: Supercomputer Helps to Identify Dangerous Asteroids, Oliver Peckman, HPC Wire, 04 March 2020, link
Elf reuzestenen op ramkoers met de aarde?, Annelies Bes, 13 February 2020, Kijk Magazine, link
Leidse sterrenkundigen ontdekken aardscheerders-in-spé, NOVA, 12 February 2020, link